Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA1Q9UND3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AC004461.1-201ENST00000412461 403 ntBASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 LINC02084-201ENST00000606069 1096 ntBASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AL513210.1-201ENST00000629608 234 ntBASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPA1Q9UND3 AC009053.2-201ENST00000563701 2365 ntBASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPA1Q9UND3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AL139400.1-201ENST00000366220 510 ntBASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AC002056.1-201ENST00000395613 760 ntBASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms