Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 GPR53P-205ENST00000457298 1084 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 RNA5SP410-201ENST00000516285 106 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 TUBB8P12-201ENST00000308911 1335 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 TUBB7P-202ENST00000428444 1305 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 TUBB8P7-204ENST00000567960 1332 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 BTBD7P1-201ENST00000447253 1453 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 AC138969.3-201ENST00000546612 1459 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 AC138932.2-201ENST00000548268 1459 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 AC126755.4-201ENST00000549796 1459 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 AL138688.1-201ENST00000624851 1594 ntBASIC19.13■□□□□ 0.65
PNMA3Q9UL41 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PNMA3Q9UL41 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 API5-211ENST00000534695 560 ntTSL 5 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PNMA3Q9UL41 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 ZNF890P-202ENST00000530367 1156 ntBASIC19.11■□□□□ 0.65
PNMA3Q9UL41 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA3Q9UL41 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms