Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 KRT18P35-201ENST00000510488 1269 ntBASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 NKAPP1-205ENST00000585790 367 ntBASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 AL121772.3-201ENST00000610840 674 ntBASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD1Q9NXG2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.77■□□□□ 0.11
THUMPD1Q9NXG2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 ARMC10P1-201ENST00000313754 855 ntBASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 SCARNA2-201ENST00000458748 420 ntBASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 LINC00554-201ENST00000564841 3011 ntBASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.76■□□□□ 0.11
THUMPD1Q9NXG2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 PAWRP1-201ENST00000451083 565 ntBASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 FOSL1P1-201ENST00000511041 816 ntBASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 MTDHP3-201ENST00000594186 672 ntBASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 AC064862.7-201ENST00000604520 867 ntBASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 AL355877.3-201ENST00000622820 899 ntBASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 AL365203.3-201ENST00000609742 2057 ntBASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THUMPD1Q9NXG2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms