Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 AC107918.2-201ENST00000530817 355 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 OR7E47P-204ENST00000575924 449 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 FAM197Y3-203ENST00000618346 717 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 AC007064.4-201ENST00000637740 555 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CDH20Q9HBT6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CDH20Q9HBT6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 AC068587.6-202ENST00000641839 5619 ntBASIC14.64□□□□□ -0.07
CDH20Q9HBT6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 FAM185BP-201ENST00000443595 716 ntBASIC14.64□□□□□ -0.07
CDH20Q9HBT6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH20Q9HBT6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 AC005915.1-201ENST00000624912 2018 ntBASIC14.63□□□□□ -0.07
CDH20Q9HBT6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 PMS2P1-201ENST00000431037 1228 ntBASIC14.63□□□□□ -0.07
CDH20Q9HBT6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 AC096734.2-201ENST00000562054 433 ntBASIC14.63□□□□□ -0.07
CDH20Q9HBT6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 AC010507.1-201ENST00000633895 436 ntBASIC14.63□□□□□ -0.07
CDH20Q9HBT6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH20Q9HBT6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms