Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 AC104692.2-201ENST00000603054 253 ntBASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC40Q9H9A6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AL031284.1-201ENST00000419297 478 ntBASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AC092910.1-201ENST00000482027 1129 ntBASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AL160237.2-201ENST00000556165 472 ntBASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AC010654.1-201ENST00000615722 808 ntBASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 AC026691.1-201ENST00000602502 2017 ntBASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRC40Q9H9A6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 MIR7706-201ENST00000613747 67 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 AC004790.2-201ENST00000623588 572 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 AL031731.1-201ENST00000642131 2094 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms