Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 AC020765.3-201ENST00000613051 740 ntBASIC19.67■□□□□ 0.74
RNF41Q9H4P4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC016027.1-202ENST00000607927 1699 ntBASIC19.66■□□□□ 0.74
RNF41Q9H4P4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC211486.1-202ENST00000416371 468 ntBASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 KRT18P34-201ENST00000488218 1270 ntBASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC211476.1-201ENST00000503899 468 ntBASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 AGGF1P2-201ENST00000426656 2106 ntBASIC19.66■□□□□ 0.74
RNF41Q9H4P4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.66■□□□□ 0.74
RNF41Q9H4P4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF41Q9H4P4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 GPAA1P2-202ENST00000606848 1787 ntBASIC19.65■□□□□ 0.74
RNF41Q9H4P4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 TFAMP1-201ENST00000412727 736 ntBASIC19.65■□□□□ 0.74
RNF41Q9H4P4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 AC026120.1-201ENST00000611536 926 ntBASIC19.65■□□□□ 0.74
RNF41Q9H4P4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 GGT4P-201ENST00000623672 1708 ntBASIC19.65■□□□□ 0.74
RNF41Q9H4P4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF41Q9H4P4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.64■□□□□ 0.74
RNF41Q9H4P4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF41Q9H4P4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF41Q9H4P4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF41Q9H4P4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RNF41Q9H4P4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RNF41Q9H4P4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms