Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC68Q9H2F9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC68Q9H2F9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 DUX4L17-201ENST00000557360 1267 ntBASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC68Q9H2F9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 PTCHD3P3-201ENST00000403073 906 ntBASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 ELK2BP-201ENST00000415014 1224 ntBASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 MIR1199-201ENST00000621445 119 ntBASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 AL805961.1-202ENST00000641562 540 ntBASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 LINC00895-201ENST00000629028 1637 ntBASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC68Q9H2F9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 RPS2P1-201ENST00000434010 821 ntBASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 PAWRP1-201ENST00000451083 565 ntBASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 AF186996.4-201ENST00000467186 377 ntBASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms