Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 AC067930.6-201ENST00000623257 4947 ntBASIC16.05■□□□□ 0.16
THUMPD3Q9BV44 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ACTG1P4-201ENST00000425123 1122 ntBASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 BNIP3P18-201ENST00000593976 575 ntBASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 AC006538.1-201ENST00000567905 1585 ntBASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 ME2P1-201ENST00000426028 1970 ntBASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD3Q9BV44 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 AC005052.1-201ENST00000625181 2492 ntBASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 AL020989.1-201ENST00000422979 469 ntBASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 HLA-J-202ENST00000469281 1241 ntBASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 AC099336.1-202ENST00000602961 463 ntBASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms