Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AC018695.7-201ENST00000624587 2492 ntBASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AC006538.3-201ENST00000612495 578 ntBASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ALOX12P2-203ENST00000570921 1945 ntBASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
YIPF4Q9BSR8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC002310.6-201ENST00000624451 1377 ntBASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 RPS15P9-201ENST00000494093 319 ntBASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC012640.2-201ENST00000561606 901 ntBASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.77■□□□□ 0.12
YIPF4Q9BSR8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
YIPF4Q9BSR8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
YIPF4Q9BSR8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
YIPF4Q9BSR8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms