Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRAMP1Q96RY5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 AC112492.5-201ENST00000421897 457 ntBASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 KRT17P8-201ENST00000540749 863 ntBASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.19■□□□□ 0.82
CRAMP1Q96RY5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AL391256.1-201ENST00000443260 1855 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AC067852.2-201ENST00000590513 2313 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 MIR1909-201ENST00000411312 80 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AP002490.2-201ENST00000524791 560 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 TPRX2P-201ENST00000535362 881 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AC023310.3-201ENST00000557027 670 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AC100756.1-201ENST00000562736 682 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AC138749.3-201ENST00000567691 622 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 AC116165.1-201ENST00000611806 668 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 MIR6069-201ENST00000620069 79 ntBASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRAMP1Q96RY5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 RPS2P32-201ENST00000439199 892 ntBASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 MYCLP2-201ENST00000449268 967 ntBASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 RN7SL837P-201ENST00000463010 287 ntBASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.17■□□□□ 0.82
CRAMP1Q96RY5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms