Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 LINC00895-201ENST00000629028 1637 ntBASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 PRORSD1P-201ENST00000295112 541 ntBASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 RPPH1-201ENST00000516869 333 ntBASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 AC006486.2-201ENST00000624246 2199 ntBASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 AC007292.2-201ENST00000593524 1812 ntBASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IPQ96QF0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 MYO15B-237ENST00000642007 4893 ntBASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 PRAL-201ENST00000624952 3286 ntBASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 AF186192.3-201ENST00000583427 947 ntBASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IPQ96QF0 GRK6P1-201ENST00000400595 1711 ntBASIC16.33■□□□□ 0.21
RAB3IPQ96QF0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IPQ96QF0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IPQ96QF0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IPQ96QF0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.33■□□□□ 0.21
RAB3IPQ96QF0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 COX5BP2-201ENST00000392354 334 ntBASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms