Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 GPAA1P2-202ENST00000606848 1787 ntBASIC13.87□□□□□ -0.19
GAFA1Q96PS6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.87□□□□□ -0.19
GAFA1Q96PS6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 MCCD1P2-201ENST00000423228 335 ntBASIC13.87□□□□□ -0.19
GAFA1Q96PS6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GAFA1Q96PS6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 AC084018.2-201ENST00000613093 2607 ntBASIC13.86□□□□□ -0.19
GAFA1Q96PS6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 AC002056.1-201ENST00000395613 760 ntBASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 AC112191.1-201ENST00000523689 701 ntBASIC13.86□□□□□ -0.19
GAFA1Q96PS6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 AC091812.2-201ENST00000619081 385 ntBASIC13.86□□□□□ -0.19
GAFA1Q96PS6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms