Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 AC114501.2-201ENST00000439631 535 ntBASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.18■□□□□ 0.34
NECTIN4Q96NY8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TTTY23B-201ENST00000442790 549 ntBASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AC022210.1-201ENST00000449856 793 ntBASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 WASH4P-201ENST00000564273 1246 ntBASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NECTIN4Q96NY8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms