Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC58Q96CX6 AC126177.1-201ENST00000547829 2218 ntBASIC15.95■□□□□ 0.14
LRRC58Q96CX6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC58Q96CX6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC58Q96CX6 AL513477.1-201ENST00000602865 2407 ntBASIC15.95■□□□□ 0.14
LRRC58Q96CX6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC58Q96CX6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 BX276092.5-203ENST00000456199 560 ntBASIC15.94■□□□□ 0.14
LRRC58Q96CX6 MINOS1P3-201ENST00000457048 203 ntBASIC15.94■□□□□ 0.14
LRRC58Q96CX6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 LINC01238-205ENST00000567549 1107 ntBASIC15.94■□□□□ 0.14
LRRC58Q96CX6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 AL121672.3-201ENST00000608644 468 ntBASIC15.94■□□□□ 0.14
LRRC58Q96CX6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC58Q96CX6 AL590787.1-201ENST00000568856 1315 ntBASIC15.94■□□□□ 0.14
LRRC58Q96CX6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 AC096582.2-201ENST00000510860 516 ntBASIC15.93■□□□□ 0.14
LRRC58Q96CX6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 BNIP3P18-201ENST00000593976 575 ntBASIC15.93■□□□□ 0.14
LRRC58Q96CX6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.93■□□□□ 0.14
LRRC58Q96CX6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC58Q96CX6 AL031731.1-201ENST00000642131 2094 ntBASIC15.93■□□□□ 0.14
LRRC58Q96CX6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms