Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDF1Q96CC6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 FAM185BP-201ENST00000443595 716 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 AP001005.1-201ENST00000571755 1248 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 LINC02199-201ENST00000506655 2702 ntBASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RHBDF1Q96CC6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 TPM4P1-201ENST00000436100 807 ntBASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RHBDF1Q96CC6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.19
RHBDF1Q96CC6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.19
RHBDF1Q96CC6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDF1Q96CC6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDF1Q96CC6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDF1Q96CC6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDF1Q96CC6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.26■□□□□ 0.19
RHBDF1Q96CC6 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms