Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 AL365203.3-201ENST00000609742 2057 ntBASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.41■□□□□ 0.38
C1orf54Q8WWF1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 MTDHP3-201ENST00000594186 672 ntBASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.4■□□□□ 0.38
C1orf54Q8WWF1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.38
C1orf54Q8WWF1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C1orf54Q8WWF1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C1orf54Q8WWF1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 PAWRP1-201ENST00000451083 565 ntBASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 AL139288.1-201ENST00000623748 933 ntBASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 AL596087.1-201ENST00000400979 1969 ntBASIC17.39■□□□□ 0.37
C1orf54Q8WWF1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 AC024909.3-201ENST00000611513 2257 ntBASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1orf54Q8WWF1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms