Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL9Q8NET4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RTL9Q8NET4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AC060834.1-201ENST00000443027 2032 ntBASIC20.43■□□□□ 0.86
RTL9Q8NET4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AC003101.2-201ENST00000612557 442 ntBASIC20.43■□□□□ 0.86
RTL9Q8NET4 AC020765.3-201ENST00000613051 740 ntBASIC20.43■□□□□ 0.86
RTL9Q8NET4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL9Q8NET4 AC139713.2-201ENST00000641328 2723 ntBASIC20.43■□□□□ 0.86
RTL9Q8NET4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RTL9Q8NET4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL9Q8NET4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.42■□□□□ 0.86
RTL9Q8NET4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 GGT4P-201ENST00000623672 1708 ntBASIC20.41■□□□□ 0.86
RTL9Q8NET4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AC009477.1-201ENST00000452936 217 ntBASIC20.41■□□□□ 0.86
RTL9Q8NET4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AL133215.2-201ENST00000609242 977 ntBASIC20.41■□□□□ 0.86
RTL9Q8NET4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL9Q8NET4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL9Q8NET4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms