Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 AL049840.3-201ENST00000602669 611 ntBASIC18.84■□□□□ 0.61
SHC4Q6S5L8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 ACTL9-202ENST00000612068 1252 ntBASIC18.84■□□□□ 0.61
SHC4Q6S5L8 AC117500.6-201ENST00000624871 588 ntBASIC18.84■□□□□ 0.61
SHC4Q6S5L8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SHC4Q6S5L8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC4Q6S5L8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SHC4Q6S5L8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC4Q6S5L8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC4Q6S5L8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC4Q6S5L8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC4Q6S5L8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 AF186996.4-201ENST00000467186 377 ntBASIC18.83■□□□□ 0.6
SHC4Q6S5L8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 AC010654.1-201ENST00000615722 808 ntBASIC18.83■□□□□ 0.6
SHC4Q6S5L8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.83■□□□□ 0.6
SHC4Q6S5L8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.83■□□□□ 0.6
SHC4Q6S5L8 AC024909.3-201ENST00000611513 2257 ntBASIC18.83■□□□□ 0.6
SHC4Q6S5L8 AC006449.6-201ENST00000612330 2296 ntBASIC18.83■□□□□ 0.6
SHC4Q6S5L8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.82■□□□□ 0.6
SHC4Q6S5L8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 REXO1L8P-201ENST00000604378 1897 ntBASIC18.82■□□□□ 0.6
SHC4Q6S5L8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 MRPL20P1-201ENST00000400819 433 ntBASIC18.82■□□□□ 0.6
SHC4Q6S5L8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 RN7SL510P-201ENST00000581311 263 ntBASIC18.82■□□□□ 0.6
SHC4Q6S5L8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 AC104692.2-201ENST00000603054 253 ntBASIC18.82■□□□□ 0.6
SHC4Q6S5L8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 AL031008.1-201ENST00000619963 541 ntBASIC18.82■□□□□ 0.6
SHC4Q6S5L8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC4Q6S5L8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 LINC01144-201ENST00000626198 1710 ntBASIC18.81■□□□□ 0.6
SHC4Q6S5L8 AL162727.3-201ENST00000635661 2787 ntBASIC18.81■□□□□ 0.6
SHC4Q6S5L8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.81■□□□□ 0.6
SHC4Q6S5L8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC4Q6S5L8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms