Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 ALOX12P2-203ENST00000570921 1945 ntBASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 AL773604.1-201ENST00000617417 272 ntBASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXR1Q6PIV2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 MIR149-201ENST00000384879 89 ntBASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 MIR940-201ENST00000401276 94 ntBASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXR1Q6PIV2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms