Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 PTCHD3P3-201ENST00000403073 906 ntBASIC16.3■□□□□ 0.2
SGO1Q5FBB7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 AC021087.4-201ENST00000563761 564 ntBASIC16.3■□□□□ 0.2
SGO1Q5FBB7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.3■□□□□ 0.2
SGO1Q5FBB7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 AC063926.3-201ENST00000624734 5658 ntBASIC16.3■□□□□ 0.2
SGO1Q5FBB7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 LINC02199-201ENST00000506655 2702 ntBASIC16.3■□□□□ 0.2
SGO1Q5FBB7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SGO1Q5FBB7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 KRT18P56-201ENST00000507275 550 ntBASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 IFNL4P1-201ENST00000607083 540 ntBASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 AC005052.1-201ENST00000625181 2492 ntBASIC16.29■□□□□ 0.2
SGO1Q5FBB7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SGO1Q5FBB7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 LINC00895-201ENST00000629028 1637 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms