Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 MIR662-201ENST00000384847 95 ntBASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 AC092597.1-201ENST00000487352 616 ntBASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 GGT4P-201ENST00000623672 1708 ntBASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 AP005117.1-202ENST00000581724 1908 ntBASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ANKRD55Q3KP44 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 AP002414.2-201ENST00000591780 3365 ntBASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 AC125634.1-201ENST00000438758 1403 ntBASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 AC005332.3-201ENST00000589904 676 ntBASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ANKRD55Q3KP44 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 GGT3P-204ENST00000453783 1664 ntBASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 ARMC10P1-201ENST00000313754 855 ntBASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 STARP1-201ENST00000397973 869 ntBASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.92□□□□□ -0.18
ANKRD55Q3KP44 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms