Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.35■□□□□ 0.37
EFEMP1Q12805 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFEMP1Q12805 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFEMP1Q12805 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFEMP1Q12805 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFEMP1Q12805 AL603756.1-201ENST00000606511 2163 ntBASIC17.35■□□□□ 0.37
EFEMP1Q12805 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 AC005237.2-201ENST00000434368 219 ntBASIC17.34■□□□□ 0.37
EFEMP1Q12805 METTL21AP1-201ENST00000438852 635 ntBASIC17.34■□□□□ 0.37
EFEMP1Q12805 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFEMP1Q12805 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
EFEMP1Q12805 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 RNF216P1-203ENST00000404404 2427 ntBASIC17.33■□□□□ 0.37
EFEMP1Q12805 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.33■□□□□ 0.37
EFEMP1Q12805 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
EFEMP1Q12805 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFEMP1Q12805 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.33■□□□□ 0.36
EFEMP1Q12805 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 SPCS2P4-201ENST00000436160 681 ntBASIC17.33■□□□□ 0.36
EFEMP1Q12805 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFEMP1Q12805 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
EFEMP1Q12805 AC022211.2-201ENST00000585075 2527 ntBASIC17.32■□□□□ 0.36
EFEMP1Q12805 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 IGHV3-62-201ENST00000520057 340 ntBASIC17.32■□□□□ 0.36
EFEMP1Q12805 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 AC093520.2-201ENST00000561830 333 ntBASIC17.32■□□□□ 0.36
EFEMP1Q12805 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms