Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX4P78413 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX4P78413 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 SPDYE21P-201ENST00000413323 827 ntBASIC17.45■□□□□ 0.38
IRX4P78413 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX4P78413 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX4P78413 VN2R19P-201ENST00000442399 1052 ntBASIC17.45■□□□□ 0.38
IRX4P78413 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX4P78413 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IRX4P78413 CEND1P1-201ENST00000451006 455 ntBASIC17.45■□□□□ 0.38
IRX4P78413 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX4P78413 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IRX4P78413 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX4P78413 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX4P78413 AL589182.2-201ENST00000619332 1049 ntBASIC17.45■□□□□ 0.38
IRX4P78413 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 BX276092.7-203ENST00000637198 1536 ntBASIC17.45■□□□□ 0.38
IRX4P78413 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IRX4P78413 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX4P78413 ELL2P1-201ENST00000413990 1906 ntBASIC17.45■□□□□ 0.38
IRX4P78413 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IRX4P78413 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IRX4P78413 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
IRX4P78413 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
IRX4P78413 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
IRX4P78413 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 MKNK2P1-201ENST00000437526 628 ntBASIC17.44■□□□□ 0.38
IRX4P78413 AC122714.2-201ENST00000502787 707 ntBASIC17.44■□□□□ 0.38
IRX4P78413 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
IRX4P78413 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 MIR4751-201ENST00000578027 74 ntBASIC17.44■□□□□ 0.38
IRX4P78413 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX4P78413 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX4P78413 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
IRX4P78413 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
IRX4P78413 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 AC010460.3-201ENST00000511359 1579 ntBASIC17.44■□□□□ 0.38
IRX4P78413 AC006504.4-201ENST00000592118 1568 ntBASIC17.44■□□□□ 0.38
IRX4P78413 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IRX4P78413 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX4P78413 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
IRX4P78413 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.43■□□□□ 0.38
IRX4P78413 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IRX4P78413 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 AC011467.4-201ENST00000594891 528 ntBASIC17.43■□□□□ 0.38
IRX4P78413 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.43■□□□□ 0.38
IRX4P78413 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.43■□□□□ 0.38
IRX4P78413 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 AC004706.3-202ENST00000621574 984 ntBASIC17.43■□□□□ 0.38
IRX4P78413 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IRX4P78413 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IRX4P78413 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX4P78413 GPR89P-201ENST00000407924 1495 ntBASIC17.43■□□□□ 0.38
IRX4P78413 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
IRX4P78413 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms