Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LMO4P61968 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.63□□□□□ -0.23
LMO4P61968 TSSK5P-201ENST00000423978 907 ntBASIC13.63□□□□□ -0.23
LMO4P61968 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 HLA-V-204ENST00000476601 1289 ntBASIC13.63□□□□□ -0.23
LMO4P61968 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 TERF1P3-201ENST00000505638 1227 ntBASIC13.63□□□□□ -0.23
LMO4P61968 RNA5SP410-201ENST00000516285 106 ntBASIC13.63□□□□□ -0.23
LMO4P61968 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.63□□□□□ -0.23
LMO4P61968 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.63□□□□□ -0.23
LMO4P61968 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.63□□□□□ -0.23
LMO4P61968 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 LINC02560-201ENST00000596379 459 ntBASIC13.63□□□□□ -0.23
LMO4P61968 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.63□□□□□ -0.23
LMO4P61968 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.63□□□□□ -0.23
LMO4P61968 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LMO4P61968 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.63□□□□□ -0.23
LMO4P61968 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.63□□□□□ -0.23
LMO4P61968 AL645608.8-201ENST00000606034 2086 ntBASIC13.63□□□□□ -0.23
LMO4P61968 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.63□□□□□ -0.23
LMO4P61968 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.63□□□□□ -0.23
LMO4P61968 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.63□□□□□ -0.23
LMO4P61968 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.63□□□□□ -0.23
LMO4P61968 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LMO4P61968 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 MRPS18AP1-201ENST00000414458 589 ntBASIC13.62□□□□□ -0.23
LMO4P61968 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 AC093724.1-201ENST00000448659 1027 ntBASIC13.62□□□□□ -0.23
LMO4P61968 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.62□□□□□ -0.23
LMO4P61968 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.62□□□□□ -0.23
LMO4P61968 AC190387.1-201ENST00000551683 408 ntBASIC13.62□□□□□ -0.23
LMO4P61968 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.62□□□□□ -0.23
LMO4P61968 RN7SL828P-201ENST00000607615 303 ntBASIC13.62□□□□□ -0.23
LMO4P61968 AC008761.3-201ENST00000624803 892 ntBASIC13.62□□□□□ -0.23
LMO4P61968 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.62□□□□□ -0.23
LMO4P61968 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.62□□□□□ -0.23
LMO4P61968 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO4P61968 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LMO4P61968 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LMO4P61968 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.61□□□□□ -0.23
LMO4P61968 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LMO4P61968 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO4P61968 GPAA1P2-202ENST00000606848 1787 ntBASIC13.61□□□□□ -0.23
LMO4P61968 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms