Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VSX2P58304 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
VSX2P58304 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16■□□□□ 0.15
VSX2P58304 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16■□□□□ 0.15
VSX2P58304 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16■□□□□ 0.15
VSX2P58304 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16■□□□□ 0.15
VSX2P58304 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16■□□□□ 0.15
VSX2P58304 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16■□□□□ 0.15
VSX2P58304 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16■□□□□ 0.15
VSX2P58304 AC134684.3-201ENST00000641758 218 ntBASIC16■□□□□ 0.15
VSX2P58304 AC092902.6-201ENST00000641783 218 ntBASIC16■□□□□ 0.15
VSX2P58304 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VSX2P58304 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VSX2P58304 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16■□□□□ 0.15
VSX2P58304 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VSX2P58304 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VSX2P58304 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16■□□□□ 0.15
VSX2P58304 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16■□□□□ 0.15
VSX2P58304 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
VSX2P58304 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16■□□□□ 0.15
VSX2P58304 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 AL391256.1-201ENST00000443260 1855 ntBASIC15.99■□□□□ 0.15
VSX2P58304 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.99■□□□□ 0.15
VSX2P58304 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.99■□□□□ 0.15
VSX2P58304 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 RNU1-129P-201ENST00000384064 167 ntBASIC15.99■□□□□ 0.15
VSX2P58304 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.99■□□□□ 0.15
VSX2P58304 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VSX2P58304 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.99■□□□□ 0.15
VSX2P58304 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.99■□□□□ 0.15
VSX2P58304 AC004967.1-201ENST00000453589 447 ntBASIC15.99■□□□□ 0.15
VSX2P58304 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.99■□□□□ 0.15
VSX2P58304 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
VSX2P58304 YBX1P5-201ENST00000509441 847 ntBASIC15.99■□□□□ 0.15
VSX2P58304 AP002490.2-201ENST00000524791 560 ntBASIC15.99■□□□□ 0.15
VSX2P58304 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.99■□□□□ 0.15
VSX2P58304 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.99■□□□□ 0.15
VSX2P58304 U1.21-201ENST00000580816 167 ntBASIC15.99■□□□□ 0.15
VSX2P58304 AL009183.1-201ENST00000603760 355 ntBASIC15.99■□□□□ 0.15
VSX2P58304 AL031055.1-201ENST00000606362 631 ntBASIC15.99■□□□□ 0.15
VSX2P58304 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.99■□□□□ 0.15
VSX2P58304 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.99■□□□□ 0.15
VSX2P58304 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VSX2P58304 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.99■□□□□ 0.15
VSX2P58304 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VSX2P58304 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.98■□□□□ 0.15
VSX2P58304 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
VSX2P58304 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.98■□□□□ 0.15
VSX2P58304 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VSX2P58304 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
VSX2P58304 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.98■□□□□ 0.15
VSX2P58304 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.98■□□□□ 0.15
VSX2P58304 ACTG1P14-201ENST00000446382 1122 ntBASIC15.98■□□□□ 0.15
VSX2P58304 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.98■□□□□ 0.15
VSX2P58304 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.98■□□□□ 0.15
VSX2P58304 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms