Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN2P57739 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN2P57739 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN2P57739 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN2P57739 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN2P57739 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.45■□□□□ 0.22
CLDN2P57739 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN2P57739 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CLDN2P57739 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN2P57739 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN2P57739 AC060834.1-201ENST00000443027 2032 ntBASIC16.45■□□□□ 0.22
CLDN2P57739 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN2P57739 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLDN2P57739 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN2P57739 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLDN2P57739 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 AL645608.8-201ENST00000606034 2086 ntBASIC16.44■□□□□ 0.22
CLDN2P57739 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN2P57739 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN2P57739 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CLDN2P57739 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN2P57739 AC142381.1-201ENST00000426099 345 ntBASIC16.44■□□□□ 0.22
CLDN2P57739 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDN2P57739 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN2P57739 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDN2P57739 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN2P57739 INGX-202ENST00000489074 768 ntBASIC16.44■□□□□ 0.22
CLDN2P57739 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 IGHV3-42-201ENST00000520410 361 ntBASIC16.44■□□□□ 0.22
CLDN2P57739 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDN2P57739 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN2P57739 MIR4745-201ENST00000577608 62 ntBASIC16.44■□□□□ 0.22
CLDN2P57739 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN2P57739 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN2P57739 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.44■□□□□ 0.22
CLDN2P57739 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN2P57739 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN2P57739 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN2P57739 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN2P57739 SNX33P1-201ENST00000592116 1762 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN2P57739 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 RNA5SP421-201ENST00000516864 134 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 AC105233.2-201ENST00000523697 349 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 AF228730.5-201ENST00000530288 346 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 AC140878.1-201ENST00000565277 250 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN2P57739 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN2P57739 AC013467.2-201ENST00000605472 835 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 AL390754.1-201ENST00000619088 582 ntBASIC16.43■□□□□ 0.22
CLDN2P57739 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN2P57739 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN2P57739 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN2P57739 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN2P57739 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN2P57739 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms