Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
PER3P56645 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.55■□□□□ 0.08
PER3P56645 KRT19P2-202ENST00000557173 1012 ntBASIC15.55■□□□□ 0.08
PER3P56645 AC023141.13-201ENST00000604991 943 ntBASIC15.55■□□□□ 0.08
PER3P56645 AC019129.2-201ENST00000609837 1235 ntBASIC15.55■□□□□ 0.08
PER3P56645 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 AC093512.1-201ENST00000617969 520 ntBASIC15.55■□□□□ 0.08
PER3P56645 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PER3P56645 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 AC105020.1-201ENST00000435356 2205 ntBASIC15.55■□□□□ 0.08
PER3P56645 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 FLJ16779-201ENST00000612722 7638 ntBASIC15.54■□□□□ 0.08
PER3P56645 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 KRT18P55-202ENST00000578578 1546 ntBASIC15.54■□□□□ 0.08
PER3P56645 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.54■□□□□ 0.08
PER3P56645 AC008741.2-201ENST00000612792 3115 ntBASIC15.54■□□□□ 0.08
PER3P56645 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PER3P56645 FAM86GP-201ENST00000448322 971 ntBASIC15.54■□□□□ 0.08
PER3P56645 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.54■□□□□ 0.08
PER3P56645 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 RNA5SP421-201ENST00000516864 134 ntBASIC15.54■□□□□ 0.08
PER3P56645 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.54■□□□□ 0.08
PER3P56645 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 AC190387.1-201ENST00000551683 408 ntBASIC15.54■□□□□ 0.08
PER3P56645 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 AC010507.1-201ENST00000633895 436 ntBASIC15.54■□□□□ 0.08
PER3P56645 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PER3P56645 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PER3P56645 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 AC148477.5-201ENST00000625164 1645 ntBASIC15.54■□□□□ 0.08
PER3P56645 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PER3P56645 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms