Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 AL031731.1-201ENST00000642131 2094 ntBASIC16.28■□□□□ 0.2
AP1S2P56377 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S2P56377 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
AP1S2P56377 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
AP1S2P56377 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.27■□□□□ 0.2
AP1S2P56377 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S2P56377 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S2P56377 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S2P56377 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S2P56377 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S2P56377 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.27■□□□□ 0.2
AP1S2P56377 IGLL3P-201ENST00000412472 434 ntBASIC16.27■□□□□ 0.2
AP1S2P56377 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
AP1S2P56377 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 FDX1P1-201ENST00000449115 551 ntBASIC16.27■□□□□ 0.2
AP1S2P56377 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S2P56377 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.27■□□□□ 0.2
AP1S2P56377 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.27■□□□□ 0.2
AP1S2P56377 AC096734.2-201ENST00000562054 433 ntBASIC16.27■□□□□ 0.2
AP1S2P56377 AL031432.2-201ENST00000566714 459 ntBASIC16.27■□□□□ 0.2
AP1S2P56377 AL928711.1-201ENST00000570165 459 ntBASIC16.27■□□□□ 0.2
AP1S2P56377 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 MIR3909-201ENST00000579518 119 ntBASIC16.27■□□□□ 0.2
AP1S2P56377 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
AP1S2P56377 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S2P56377 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S2P56377 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S2P56377 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.27■□□□□ 0.19
AP1S2P56377 ME2P1-201ENST00000426028 1970 ntBASIC16.27■□□□□ 0.19
AP1S2P56377 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S2P56377 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S2P56377 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
AP1S2P56377 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S2P56377 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
AP1S2P56377 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AP1S2P56377 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S2P56377 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S2P56377 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.26■□□□□ 0.19
AP1S2P56377 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AP1S2P56377 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S2P56377 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 GGT4P-201ENST00000623672 1708 ntBASIC16.26■□□□□ 0.19
AP1S2P56377 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 AL513480.1-201ENST00000451731 511 ntBASIC16.26■□□□□ 0.19
AP1S2P56377 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S2P56377 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.26■□□□□ 0.19
AP1S2P56377 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AP1S2P56377 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S2P56377 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S2P56377 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP1S2P56377 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S2P56377 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S2P56377 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms