Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
EPHA4P54764 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
EPHA4P54764 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.06■□□□□ 0.16
EPHA4P54764 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.06■□□□□ 0.16
EPHA4P54764 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.06■□□□□ 0.16
EPHA4P54764 SPDYE14P-201ENST00000442619 822 ntBASIC16.06■□□□□ 0.16
EPHA4P54764 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 AC051619.7-201ENST00000568314 623 ntBASIC16.06■□□□□ 0.16
EPHA4P54764 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.06■□□□□ 0.16
EPHA4P54764 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.06■□□□□ 0.16
EPHA4P54764 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.06■□□□□ 0.16
EPHA4P54764 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
EPHA4P54764 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPHA4P54764 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA4P54764 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 AL139384.1-201ENST00000612143 3047 ntBASIC16.05■□□□□ 0.16
EPHA4P54764 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
EPHA4P54764 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 KRT8P39-201ENST00000396270 1433 ntBASIC16.05■□□□□ 0.16
EPHA4P54764 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
EPHA4P54764 PP12613-201ENST00000424958 2230 ntBASIC16.05■□□□□ 0.16
EPHA4P54764 TUBB3P1-201ENST00000405796 1332 ntBASIC16.05■□□□□ 0.16
EPHA4P54764 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
EPHA4P54764 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.05■□□□□ 0.16
EPHA4P54764 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.05■□□□□ 0.16
EPHA4P54764 ALG1L8P-201ENST00000533887 760 ntBASIC16.05■□□□□ 0.16
EPHA4P54764 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.05■□□□□ 0.16
EPHA4P54764 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA4P54764 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
EPHA4P54764 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA4P54764 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA4P54764 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA4P54764 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA4P54764 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA4P54764 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
EPHA4P54764 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms