Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.8■□□□□ 0.6
EPHB4P54760 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
EPHB4P54760 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
EPHB4P54760 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHB4P54760 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.8■□□□□ 0.6
EPHB4P54760 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHB4P54760 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
EPHB4P54760 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHB4P54760 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.8■□□□□ 0.6
EPHB4P54760 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.8■□□□□ 0.6
EPHB4P54760 AL359881.2-201ENST00000602973 570 ntBASIC18.8■□□□□ 0.6
EPHB4P54760 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
EPHB4P54760 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHB4P54760 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 AL139384.1-201ENST00000612143 3047 ntBASIC18.8■□□□□ 0.6
EPHB4P54760 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EPHB4P54760 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHB4P54760 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHB4P54760 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 AC133963.1-201ENST00000504166 1679 ntBASIC18.79■□□□□ 0.6
EPHB4P54760 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EPHB4P54760 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.79■□□□□ 0.6
EPHB4P54760 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 SPCS2P4-201ENST00000436160 681 ntBASIC18.79■□□□□ 0.6
EPHB4P54760 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.79■□□□□ 0.6
EPHB4P54760 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 AC026150.2-201ENST00000564693 1156 ntBASIC18.79■□□□□ 0.6
EPHB4P54760 AL135744.1-201ENST00000565098 629 ntBASIC18.79■□□□□ 0.6
EPHB4P54760 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.79■□□□□ 0.6
EPHB4P54760 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.79■□□□□ 0.6
EPHB4P54760 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.79■□□□□ 0.6
EPHB4P54760 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.79■□□□□ 0.6
EPHB4P54760 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EPHB4P54760 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHB4P54760 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.79■□□□□ 0.6
EPHB4P54760 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB4P54760 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.78■□□□□ 0.6
EPHB4P54760 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EPHB4P54760 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EPHB4P54760 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHB4P54760 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB4P54760 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB4P54760 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
EPHB4P54760 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB4P54760 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.78■□□□□ 0.6
EPHB4P54760 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.78■□□□□ 0.6
EPHB4P54760 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB4P54760 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB4P54760 CR383656.12-201ENST00000549567 513 ntBASIC18.78■□□□□ 0.6
EPHB4P54760 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.78■□□□□ 0.6
EPHB4P54760 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB4P54760 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.78■□□□□ 0.6
EPHB4P54760 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EPHB4P54760 AC025048.6-201ENST00000634326 1161 ntBASIC18.78■□□□□ 0.6
EPHB4P54760 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB4P54760 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB4P54760 AC009949.1-201ENST00000623048 1830 ntBASIC18.78■□□□□ 0.6
EPHB4P54760 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms