Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMSP52788 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.72■□□□□ 0.11
SMSP52788 DNAJB3-202ENST00000449667 1266 ntBASIC15.72■□□□□ 0.11
SMSP52788 PRYP5-201ENST00000451909 266 ntBASIC15.72■□□□□ 0.11
SMSP52788 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.72■□□□□ 0.11
SMSP52788 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.72■□□□□ 0.11
SMSP52788 AC122714.2-201ENST00000502787 707 ntBASIC15.72■□□□□ 0.11
SMSP52788 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.72■□□□□ 0.11
SMSP52788 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.72■□□□□ 0.11
SMSP52788 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SMSP52788 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SMSP52788 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SMSP52788 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
SMSP52788 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMSP52788 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.72■□□□□ 0.11
SMSP52788 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SMSP52788 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.71■□□□□ 0.11
SMSP52788 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.71■□□□□ 0.11
SMSP52788 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.71■□□□□ 0.11
SMSP52788 AC103564.2-201ENST00000432853 1299 ntBASIC15.71■□□□□ 0.11
SMSP52788 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
SMSP52788 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.71■□□□□ 0.11
SMSP52788 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.71■□□□□ 0.11
SMSP52788 SNHG9-202ENST00000564014 471 ntBASIC15.71■□□□□ 0.11
SMSP52788 AC005829.1-201ENST00000570002 483 ntBASIC15.71■□□□□ 0.11
SMSP52788 AC109462.3-201ENST00000573934 613 ntBASIC15.71■□□□□ 0.11
SMSP52788 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.71■□□□□ 0.11
SMSP52788 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
SMSP52788 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
SMSP52788 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.71■□□□□ 0.11
SMSP52788 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMSP52788 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMSP52788 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMSP52788 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMSP52788 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.71■□□□□ 0.1
SMSP52788 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SMSP52788 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMSP52788 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMSP52788 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.71■□□□□ 0.1
SMSP52788 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms