Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CLCN2P51788 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN2P51788 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLCN2P51788 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 AC092171.3-201ENST00000610122 2651 ntBASIC16.25■□□□□ 0.19
CLCN2P51788 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN2P51788 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLCN2P51788 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 OR7E14P-202ENST00000530490 1290 ntBASIC16.25■□□□□ 0.19
CLCN2P51788 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLCN2P51788 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 AC148477.8-201ENST00000624298 468 ntBASIC16.25■□□□□ 0.19
CLCN2P51788 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLCN2P51788 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLCN2P51788 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN2P51788 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 RNF216P1-203ENST00000404404 2427 ntBASIC16.25■□□□□ 0.19
CLCN2P51788 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN2P51788 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN2P51788 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN2P51788 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN2P51788 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN2P51788 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLCN2P51788 SLC25A1P3-201ENST00000395415 828 ntBASIC16.24■□□□□ 0.19
CLCN2P51788 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN2P51788 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLCN2P51788 RPS2P1-201ENST00000434010 821 ntBASIC16.24■□□□□ 0.19
CLCN2P51788 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN2P51788 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 AC025062.2-201ENST00000605477 670 ntBASIC16.24■□□□□ 0.19
CLCN2P51788 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN2P51788 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN2P51788 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CLCN2P51788 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN2P51788 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms