Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.09■□□□□ 0.49
PDE6CP51160 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.09■□□□□ 0.49
PDE6CP51160 AC087163.2-201ENST00000457299 853 ntBASIC18.09■□□□□ 0.49
PDE6CP51160 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6CP51160 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PDE6CP51160 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6CP51160 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.09■□□□□ 0.49
PDE6CP51160 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6CP51160 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 MIR4751-201ENST00000578027 74 ntBASIC18.09■□□□□ 0.49
PDE6CP51160 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
PDE6CP51160 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 AC008894.3-201ENST00000624324 3103 ntBASIC18.09■□□□□ 0.49
PDE6CP51160 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.08■□□□□ 0.49
PDE6CP51160 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
PDE6CP51160 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 TOP3BP1-201ENST00000420768 1380 ntBASIC18.08■□□□□ 0.49
PDE6CP51160 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6CP51160 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.08■□□□□ 0.49
PDE6CP51160 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.08■□□□□ 0.49
PDE6CP51160 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6CP51160 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6CP51160 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 AC004832.2-201ENST00000426397 482 ntBASIC18.08■□□□□ 0.48
PDE6CP51160 AC108073.2-201ENST00000464002 357 ntBASIC18.08■□□□□ 0.48
PDE6CP51160 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6CP51160 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6CP51160 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6CP51160 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDE6CP51160 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6CP51160 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PDE6CP51160 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.07■□□□□ 0.48
PDE6CP51160 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 MRPL20P1-201ENST00000400819 433 ntBASIC18.07■□□□□ 0.48
PDE6CP51160 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 VN2R19P-201ENST00000442399 1052 ntBASIC18.07■□□□□ 0.48
PDE6CP51160 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.07■□□□□ 0.48
PDE6CP51160 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 AC010654.1-201ENST00000615722 808 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms