Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF144AP50876 AL031284.1-201ENST00000419297 478 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 KRT18P27-201ENST00000427733 1299 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF144AP50876 AC079776.4-201ENST00000511039 504 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 AC136632.2-201ENST00000512891 861 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF144AP50876 AC105339.3-201ENST00000560043 636 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF144AP50876 AC117500.6-201ENST00000624871 588 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF144AP50876 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 AC002310.6-201ENST00000624451 1377 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 HLA-A-202ENST00000376806 1854 ntBASIC15.59■□□□□ 0.09
RNF144AP50876 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF144AP50876 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF144AP50876 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
RNF144AP50876 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.58■□□□□ 0.09
RNF144AP50876 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF144AP50876 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF144AP50876 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.58■□□□□ 0.09
RNF144AP50876 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF144AP50876 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF144AP50876 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
RNF144AP50876 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RNF144AP50876 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF144AP50876 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF144AP50876 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 AL160237.2-201ENST00000556165 472 ntBASIC15.58■□□□□ 0.08
RNF144AP50876 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF144AP50876 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF144AP50876 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 MIR1199-201ENST00000621445 119 ntBASIC15.58■□□□□ 0.08
RNF144AP50876 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RNF144AP50876 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF144AP50876 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF144AP50876 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms