Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 RPS8P6-201ENST00000426177 609 ntBASIC17.62■□□□□ 0.41
TUBP50607 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 AP000344.2-201ENST00000512987 629 ntBASIC17.62■□□□□ 0.41
TUBP50607 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.62■□□□□ 0.41
TUBP50607 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.62■□□□□ 0.41
TUBP50607 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBP50607 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TUBP50607 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.62■□□□□ 0.41
TUBP50607 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 KRT8P49-201ENST00000604166 1432 ntBASIC17.62■□□□□ 0.41
TUBP50607 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBP50607 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 HMGA1P7-201ENST00000406908 502 ntBASIC17.61■□□□□ 0.41
TUBP50607 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
TUBP50607 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.61■□□□□ 0.41
TUBP50607 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TUBP50607 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.61■□□□□ 0.41
TUBP50607 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 SNHG9-202ENST00000564014 471 ntBASIC17.61■□□□□ 0.41
TUBP50607 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 AL121761.2-201ENST00000598007 1648 ntBASIC17.61■□□□□ 0.41
TUBP50607 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TUBP50607 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TUBP50607 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TUBP50607 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBP50607 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TUBP50607 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TUBP50607 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TUBP50607 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBP50607 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 ADH5P3-201ENST00000433842 1137 ntBASIC17.6■□□□□ 0.41
TUBP50607 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBP50607 AC109635.5-201ENST00000533593 962 ntBASIC17.6■□□□□ 0.41
TUBP50607 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms