Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LHX2P50458 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LHX2P50458 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LHX2P50458 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.88□□□□□ -0.03
LHX2P50458 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LHX2P50458 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.88□□□□□ -0.03
LHX2P50458 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LHX2P50458 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LHX2P50458 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LHX2P50458 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.87□□□□□ -0.03
LHX2P50458 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 AC105233.2-201ENST00000523697 349 ntBASIC14.87□□□□□ -0.03
LHX2P50458 AF228730.5-201ENST00000530288 346 ntBASIC14.87□□□□□ -0.03
LHX2P50458 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 AC073389.1-201ENST00000595595 795 ntBASIC14.87□□□□□ -0.03
LHX2P50458 AL031731.1-201ENST00000642131 2094 ntBASIC14.87□□□□□ -0.03
LHX2P50458 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LHX2P50458 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 RNF216P1-203ENST00000404404 2427 ntBASIC14.87□□□□□ -0.03
LHX2P50458 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LHX2P50458 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LHX2P50458 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LHX2P50458 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 AC080080.1-201ENST00000625121 2420 ntBASIC14.86□□□□□ -0.03
LHX2P50458 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LHX2P50458 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LHX2P50458 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.86□□□□□ -0.03
LHX2P50458 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LHX2P50458 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.86□□□□□ -0.03
LHX2P50458 RBPMS2P1-201ENST00000437762 623 ntBASIC14.86□□□□□ -0.03
LHX2P50458 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.86□□□□□ -0.03
LHX2P50458 PRYP6-201ENST00000514804 343 ntBASIC14.86□□□□□ -0.03
LHX2P50458 RFPL4AP1-201ENST00000530883 850 ntBASIC14.86□□□□□ -0.03
LHX2P50458 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LHX2P50458 AC025678.2-201ENST00000562061 970 ntBASIC14.86□□□□□ -0.03
LHX2P50458 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.86□□□□□ -0.03
LHX2P50458 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.86□□□□□ -0.03
LHX2P50458 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.86□□□□□ -0.03
LHX2P50458 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LHX2P50458 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LHX2P50458 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LHX2P50458 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LHX2P50458 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LHX2P50458 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LHX2P50458 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms