Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP13P45452 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP13P45452 AL049840.3-201ENST00000602669 611 ntBASIC17.42■□□□□ 0.38
MMP13P45452 AL356488.2-201ENST00000602755 427 ntBASIC17.42■□□□□ 0.38
MMP13P45452 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 MIR7706-201ENST00000613747 67 ntBASIC17.42■□□□□ 0.38
MMP13P45452 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
MMP13P45452 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
MMP13P45452 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 OR6D1P-203ENST00000641209 4860 ntBASIC17.41■□□□□ 0.38
MMP13P45452 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 AP002414.1-201ENST00000391405 1147 ntBASIC17.41■□□□□ 0.38
MMP13P45452 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP13P45452 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP13P45452 RPS15P9-201ENST00000494093 319 ntBASIC17.41■□□□□ 0.38
MMP13P45452 RNA5SP419-201ENST00000515908 135 ntBASIC17.41■□□□□ 0.38
MMP13P45452 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP13P45452 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP13P45452 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP13P45452 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP13P45452 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP13P45452 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MMP13P45452 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
MMP13P45452 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MMP13P45452 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP13P45452 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP13P45452 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP13P45452 AC092910.1-201ENST00000482027 1129 ntBASIC17.4■□□□□ 0.38
MMP13P45452 AC093909.1-201ENST00000504731 1122 ntBASIC17.4■□□□□ 0.38
MMP13P45452 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP13P45452 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
MMP13P45452 AC005593.1-201ENST00000624894 515 ntBASIC17.4■□□□□ 0.38
MMP13P45452 PGM5P2-202ENST00000637225 1043 ntBASIC17.4■□□□□ 0.38
MMP13P45452 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
MMP13P45452 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 PI4KAP1-204ENST00000612579 1703 ntBASIC17.4■□□□□ 0.38
MMP13P45452 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP13P45452 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP13P45452 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP13P45452 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms