Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.34□□□□□ -0.59
CXCL5P42830 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 AC113347.1-201ENST00000413321 391 ntBASIC11.34□□□□□ -0.59
CXCL5P42830 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.34□□□□□ -0.59
CXCL5P42830 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 AC112907.2-201ENST00000448639 330 ntBASIC11.34□□□□□ -0.59
CXCL5P42830 AC092647.4-201ENST00000457211 535 ntBASIC11.34□□□□□ -0.59
CXCL5P42830 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 AL353801.3-201ENST00000609898 542 ntBASIC11.34□□□□□ -0.59
CXCL5P42830 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL5P42830 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CXCL5P42830 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CXCL5P42830 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CXCL5P42830 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL5P42830 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL5P42830 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.34□□□□□ -0.59
CXCL5P42830 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
CXCL5P42830 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.33□□□□□ -0.59
CXCL5P42830 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
CXCL5P42830 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 RNF152P1-201ENST00000397754 604 ntBASIC11.33□□□□□ -0.6
CXCL5P42830 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 AC010203.1-204ENST00000548782 407 ntBASIC11.33□□□□□ -0.6
CXCL5P42830 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.33□□□□□ -0.6
CXCL5P42830 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.33□□□□□ -0.6
CXCL5P42830 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
CXCL5P42830 AL592071.1-201ENST00000611956 408 ntBASIC11.33□□□□□ -0.6
CXCL5P42830 AC005363.2-201ENST00000618631 242 ntBASIC11.33□□□□□ -0.6
CXCL5P42830 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 LINC00895-201ENST00000629028 1637 ntBASIC11.33□□□□□ -0.6
CXCL5P42830 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL5P42830 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL5P42830 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CXCL5P42830 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL5P42830 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL5P42830 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CXCL5P42830 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL5P42830 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms