Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CEACAM3P40198 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.67□□□□□ -0.22
CEACAM3P40198 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CEACAM3P40198 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.67□□□□□ -0.22
CEACAM3P40198 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.67□□□□□ -0.22
CEACAM3P40198 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
CEACAM3P40198 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CEACAM3P40198 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 PMS2P1-201ENST00000431037 1228 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 HCG4B-203ENST00000450128 991 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 KRT18P58-201ENST00000527480 1120 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CEACAM3P40198 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 AC023141.13-201ENST00000604991 943 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 AC013467.2-201ENST00000605472 835 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.67□□□□□ -0.22
CEACAM3P40198 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 AC012569.1-201ENST00000591191 1524 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.67□□□□□ -0.22
CEACAM3P40198 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.67□□□□□ -0.22
CEACAM3P40198 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.67□□□□□ -0.22
CEACAM3P40198 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CEACAM3P40198 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CEACAM3P40198 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CEACAM3P40198 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.66□□□□□ -0.22
CEACAM3P40198 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CEACAM3P40198 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.66□□□□□ -0.22
CEACAM3P40198 AC007967.2-201ENST00000432613 625 ntBASIC13.66□□□□□ -0.22
CEACAM3P40198 KRT18P3-201ENST00000451602 1288 ntBASIC13.66□□□□□ -0.22
CEACAM3P40198 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.66□□□□□ -0.22
CEACAM3P40198 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.66□□□□□ -0.22
CEACAM3P40198 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CEACAM3P40198 OR7E47P-204ENST00000575924 449 ntBASIC13.66□□□□□ -0.22
CEACAM3P40198 MIR4515-201ENST00000584082 81 ntBASIC13.66□□□□□ -0.22
CEACAM3P40198 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
CEACAM3P40198 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CEACAM3P40198 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CEACAM3P40198 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.66□□□□□ -0.22
CEACAM3P40198 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CEACAM3P40198 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CEACAM3P40198 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
CEACAM3P40198 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms