Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHKAP35790 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.66■□□□□ 0.42
CHKAP35790 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.66■□□□□ 0.42
CHKAP35790 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.66■□□□□ 0.42
CHKAP35790 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.65■□□□□ 0.42
CHKAP35790 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.65■□□□□ 0.42
CHKAP35790 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.65■□□□□ 0.42
CHKAP35790 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.65■□□□□ 0.42
CHKAP35790 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHKAP35790 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.65■□□□□ 0.42
CHKAP35790 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.65■□□□□ 0.42
CHKAP35790 AC092865.6-201ENST00000642101 219 ntBASIC17.65■□□□□ 0.42
CHKAP35790 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 BCAR1-209ENST00000546196 1340 ntBASIC17.65■□□□□ 0.42
CHKAP35790 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHKAP35790 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHKAP35790 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.64■□□□□ 0.42
CHKAP35790 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.64■□□□□ 0.41
CHKAP35790 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.64■□□□□ 0.41
CHKAP35790 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.64■□□□□ 0.41
CHKAP35790 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.64■□□□□ 0.41
CHKAP35790 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 FAM185BP-201ENST00000443595 716 ntBASIC17.64■□□□□ 0.41
CHKAP35790 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.64■□□□□ 0.41
CHKAP35790 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.64■□□□□ 0.41
CHKAP35790 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.64■□□□□ 0.41
CHKAP35790 PDPK2P-202ENST00000562415 1191 ntBASIC17.64■□□□□ 0.41
CHKAP35790 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 AC005829.1-201ENST00000570002 483 ntBASIC17.64■□□□□ 0.41
CHKAP35790 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.64■□□□□ 0.41
CHKAP35790 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHKAP35790 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 AC092364.2-201ENST00000596710 2692 ntBASIC17.64■□□□□ 0.41
CHKAP35790 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.64■□□□□ 0.41
CHKAP35790 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 PCDHA1-201ENST00000378133 2726 ntBASIC17.63■□□□□ 0.41
CHKAP35790 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.63■□□□□ 0.41
CHKAP35790 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.63■□□□□ 0.41
CHKAP35790 FRMD8P1-201ENST00000440433 1524 ntBASIC17.63■□□□□ 0.41
CHKAP35790 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHKAP35790 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.63■□□□□ 0.41
CHKAP35790 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.63■□□□□ 0.41
CHKAP35790 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHKAP35790 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms