Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 KRT8P49-201ENST00000604166 1432 ntBASIC18.34■□□□□ 0.53
KRT9P35527 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT9P35527 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT9P35527 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT9P35527 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.34■□□□□ 0.53
KRT9P35527 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
KRT9P35527 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT9P35527 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT9P35527 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT9P35527 NKAPP1-205ENST00000585790 367 ntBASIC18.34■□□□□ 0.53
KRT9P35527 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT9P35527 AL355877.3-201ENST00000622820 899 ntBASIC18.34■□□□□ 0.53
KRT9P35527 AL139288.1-201ENST00000623748 933 ntBASIC18.34■□□□□ 0.53
KRT9P35527 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT9P35527 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT9P35527 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
KRT9P35527 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT9P35527 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
KRT9P35527 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT9P35527 AC008608.2-201ENST00000606089 416 ntBASIC18.33■□□□□ 0.52
KRT9P35527 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KRT9P35527 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT9P35527 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 REXO1L6P-202ENST00000619970 1078 ntBASIC18.33■□□□□ 0.52
KRT9P35527 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 AL022326.1-202ENST00000641533 845 ntBASIC18.33■□□□□ 0.52
KRT9P35527 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.33■□□□□ 0.52
KRT9P35527 AC006277.1-201ENST00000624348 1610 ntBASIC18.33■□□□□ 0.52
KRT9P35527 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KRT9P35527 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT9P35527 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT9P35527 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KRT9P35527 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT9P35527 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT9P35527 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.32■□□□□ 0.52
KRT9P35527 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT9P35527 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT9P35527 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT9P35527 FER1L4-210ENST00000615531 5998 ntBASIC18.32■□□□□ 0.52
KRT9P35527 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT9P35527 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT9P35527 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT9P35527 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT9P35527 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT9P35527 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms