Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLCN1P35523 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CLCN1P35523 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCN1P35523 FAM210CP-201ENST00000445714 574 ntBASIC19.06■□□□□ 0.64
CLCN1P35523 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 AL136038.3-201ENST00000561909 1096 ntBASIC19.06■□□□□ 0.64
CLCN1P35523 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.06■□□□□ 0.64
CLCN1P35523 AC116407.2-201ENST00000613639 860 ntBASIC19.06■□□□□ 0.64
CLCN1P35523 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCN1P35523 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLCN1P35523 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLCN1P35523 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCN1P35523 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLCN1P35523 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLCN1P35523 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN1P35523 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLCN1P35523 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN1P35523 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN1P35523 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCN1P35523 DDX43P3-201ENST00000441064 443 ntBASIC19.05■□□□□ 0.64
CLCN1P35523 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CLCN1P35523 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN1P35523 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLCN1P35523 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 AL596087.1-201ENST00000400979 1969 ntBASIC19.04■□□□□ 0.64
CLCN1P35523 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLCN1P35523 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CLCN1P35523 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCN1P35523 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 AL049597.2-201ENST00000565575 961 ntBASIC19.04■□□□□ 0.64
CLCN1P35523 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 NTF6B-201ENST00000591913 560 ntBASIC19.04■□□□□ 0.64
CLCN1P35523 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLCN1P35523 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLCN1P35523 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLCN1P35523 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN1P35523 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN1P35523 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLCN1P35523 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CLCN1P35523 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLCN1P35523 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms