Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.02■□□□□ 0.48
HOXC8P31273 GNAQP1-201ENST00000444815 1067 ntBASIC18.02■□□□□ 0.48
HOXC8P31273 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.02■□□□□ 0.48
HOXC8P31273 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
HOXC8P31273 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 AC026979.3-201ENST00000607315 403 ntBASIC18.02■□□□□ 0.48
HOXC8P31273 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 AL033527.5-202ENST00000641632 1098 ntBASIC18.02■□□□□ 0.48
HOXC8P31273 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HOXC8P31273 AL391825.1-201ENST00000457671 1364 ntBASIC18.02■□□□□ 0.47
HOXC8P31273 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
HOXC8P31273 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 AL603756.1-201ENST00000606511 2163 ntBASIC18.01■□□□□ 0.47
HOXC8P31273 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC8P31273 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HOXC8P31273 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.01■□□□□ 0.47
HOXC8P31273 SERBP1P3-201ENST00000459980 809 ntBASIC18.01■□□□□ 0.47
HOXC8P31273 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC8P31273 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC8P31273 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HOXC8P31273 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.01■□□□□ 0.47
HOXC8P31273 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC8P31273 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.01■□□□□ 0.47
HOXC8P31273 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC8P31273 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC8P31273 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HOXC8P31273 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HOXC8P31273 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC8P31273 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.01■□□□□ 0.47
HOXC8P31273 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18■□□□□ 0.47
HOXC8P31273 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18■□□□□ 0.47
HOXC8P31273 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18■□□□□ 0.47
HOXC8P31273 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18■□□□□ 0.47
HOXC8P31273 AC093004.1-201ENST00000508850 424 ntBASIC18■□□□□ 0.47
HOXC8P31273 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18■□□□□ 0.47
HOXC8P31273 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18■□□□□ 0.47
HOXC8P31273 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18■□□□□ 0.47
HOXC8P31273 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18■□□□□ 0.47
HOXC8P31273 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HOXC8P31273 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC8P31273 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HOXC8P31273 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HOXC8P31273 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HOXC8P31273 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
HOXC8P31273 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 OR8S1-201ENST00000310194 1080 ntBASIC17.99■□□□□ 0.47
HOXC8P31273 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HOXC8P31273 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HOXC8P31273 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXC8P31273 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC8P31273 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC8P31273 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXC8P31273 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC8P31273 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms