Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.27■□□□□ 0.84
CHRNA5P30532 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHRNA5P30532 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRNA5P30532 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHRNA5P30532 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRNA5P30532 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CHRNA5P30532 AC006277.1-201ENST00000624348 1610 ntBASIC20.27■□□□□ 0.83
CHRNA5P30532 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.27■□□□□ 0.83
CHRNA5P30532 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.27■□□□□ 0.83
CHRNA5P30532 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHRNA5P30532 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CHRNA5P30532 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHRNA5P30532 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHRNA5P30532 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.26■□□□□ 0.83
CHRNA5P30532 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHRNA5P30532 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.26■□□□□ 0.83
CHRNA5P30532 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.26■□□□□ 0.83
CHRNA5P30532 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHRNA5P30532 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.26■□□□□ 0.83
CHRNA5P30532 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.26■□□□□ 0.83
CHRNA5P30532 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.26■□□□□ 0.83
CHRNA5P30532 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.26■□□□□ 0.83
CHRNA5P30532 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.26■□□□□ 0.83
CHRNA5P30532 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CHRNA5P30532 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHRNA5P30532 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHRNA5P30532 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHRNA5P30532 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHRNA5P30532 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.25■□□□□ 0.83
CHRNA5P30532 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 AC099336.1-201ENST00000417053 1171 ntBASIC20.25■□□□□ 0.83
CHRNA5P30532 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.25■□□□□ 0.83
CHRNA5P30532 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.25■□□□□ 0.83
CHRNA5P30532 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 RRP7BP-205ENST00000566851 833 ntBASIC20.25■□□□□ 0.83
CHRNA5P30532 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.25■□□□□ 0.83
CHRNA5P30532 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 AL589702.1-201ENST00000641229 1509 ntBASIC20.25■□□□□ 0.83
CHRNA5P30532 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.25■□□□□ 0.83
CHRNA5P30532 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.25■□□□□ 0.83
CHRNA5P30532 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.25■□□□□ 0.83
CHRNA5P30532 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHRNA5P30532 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRNA5P30532 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
CHRNA5P30532 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CHRNA5P30532 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 KRT43P-201ENST00000434019 910 ntBASIC20.24■□□□□ 0.83
CHRNA5P30532 AC093724.1-201ENST00000448659 1027 ntBASIC20.24■□□□□ 0.83
CHRNA5P30532 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC024267.1-201ENST00000582320 895 ntBASIC20.24■□□□□ 0.83
CHRNA5P30532 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRNA5P30532 AC026979.3-201ENST00000607315 403 ntBASIC20.24■□□□□ 0.83
CHRNA5P30532 AC244093.1-201ENST00000610837 814 ntBASIC20.24■□□□□ 0.83
CHRNA5P30532 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRNA5P30532 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRNA5P30532 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHRNA5P30532 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRNA5P30532 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA5P30532 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA5P30532 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA5P30532 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA5P30532 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRNA5P30532 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.23■□□□□ 0.83
CHRNA5P30532 AC020907.1-201ENST00000616460 1350 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms