Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
EPHA3P29320 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 AL121672.3-201ENST00000608644 468 ntBASIC16.32■□□□□ 0.2
EPHA3P29320 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHA3P29320 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
EPHA3P29320 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA3P29320 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.31■□□□□ 0.2
EPHA3P29320 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 AC092384.3-202ENST00000564646 2873 ntBASIC16.31■□□□□ 0.2
EPHA3P29320 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 AC144831.1-201ENST00000573312 2656 ntBASIC16.31■□□□□ 0.2
EPHA3P29320 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.31■□□□□ 0.2
EPHA3P29320 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.31■□□□□ 0.2
EPHA3P29320 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.31■□□□□ 0.2
EPHA3P29320 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.31■□□□□ 0.2
EPHA3P29320 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EPHA3P29320 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
EPHA3P29320 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA3P29320 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA3P29320 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 KRT18P1-202ENST00000452408 1331 ntBASIC16.3■□□□□ 0.2
EPHA3P29320 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHA3P29320 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHA3P29320 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.3■□□□□ 0.2
EPHA3P29320 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA3P29320 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 GGT4P-201ENST00000623672 1708 ntBASIC16.3■□□□□ 0.2
EPHA3P29320 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA3P29320 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EPHA3P29320 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA3P29320 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 NSUN5P1-202ENST00000421140 1535 ntBASIC16.29■□□□□ 0.2
EPHA3P29320 NSUN5P2-203ENST00000457352 1529 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms