Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MIR4515-201ENST00000584082 81 ntBASIC17.04■□□□□ 0.32
PTPN3P26045 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN3P26045 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN3P26045 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PTPN3P26045 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.04■□□□□ 0.32
PTPN3P26045 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PTPN3P26045 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN3P26045 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN3P26045 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN3P26045 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN3P26045 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.03■□□□□ 0.32
PTPN3P26045 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN3P26045 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN3P26045 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN3P26045 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN3P26045 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PTPN3P26045 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN3P26045 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PTPN3P26045 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN3P26045 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN3P26045 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PTPN3P26045 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN3P26045 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTPN3P26045 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PTPN3P26045 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.02■□□□□ 0.32
PTPN3P26045 AC079776.4-201ENST00000511039 504 ntBASIC17.02■□□□□ 0.32
PTPN3P26045 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN3P26045 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN3P26045 AC145285.3-201ENST00000564603 959 ntBASIC17.02■□□□□ 0.32
PTPN3P26045 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN3P26045 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
PTPN3P26045 AC010507.1-201ENST00000633895 436 ntBASIC17.02■□□□□ 0.32
PTPN3P26045 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTPN3P26045 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PTPN3P26045 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN3P26045 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PTPN3P26045 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 GPAA1P2-202ENST00000606848 1787 ntBASIC17.02■□□□□ 0.31
PTPN3P26045 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.02■□□□□ 0.31
PTPN3P26045 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN3P26045 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PTPN3P26045 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
PTPN3P26045 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.01■□□□□ 0.31
PTPN3P26045 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN3P26045 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN3P26045 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PTPN3P26045 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN3P26045 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN3P26045 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN3P26045 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN3P26045 HMGA1P7-201ENST00000406908 502 ntBASIC17.01■□□□□ 0.31
PTPN3P26045 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.01■□□□□ 0.31
PTPN3P26045 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN3P26045 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN3P26045 AL513480.1-201ENST00000451731 511 ntBASIC17.01■□□□□ 0.31
PTPN3P26045 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN3P26045 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms