Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL1P22362 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCL1P22362 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.38□□□□□ -0.11
CCL1P22362 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL1P22362 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL1P22362 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 PGM5P2-202ENST00000637225 1043 ntBASIC14.38□□□□□ -0.11
CCL1P22362 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCL1P22362 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCL1P22362 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CCL1P22362 AL162727.3-201ENST00000635661 2787 ntBASIC14.37□□□□□ -0.11
CCL1P22362 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL1P22362 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 MIR1199-201ENST00000621445 119 ntBASIC14.37□□□□□ -0.11
CCL1P22362 AC024909.3-201ENST00000611513 2257 ntBASIC14.37□□□□□ -0.11
CCL1P22362 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL1P22362 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL1P22362 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL1P22362 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 AC018712.1-201ENST00000455767 687 ntBASIC14.36□□□□□ -0.11
CCL1P22362 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 RNPS1P1-201ENST00000507437 918 ntBASIC14.36□□□□□ -0.11
CCL1P22362 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.36□□□□□ -0.11
CCL1P22362 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL1P22362 CLEC4GP1-201ENST00000596555 870 ntBASIC14.36□□□□□ -0.11
CCL1P22362 AL356488.2-201ENST00000602755 427 ntBASIC14.36□□□□□ -0.11
CCL1P22362 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms