Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB3BP20337 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB3BP20337 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB3BP20337 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB3BP20337 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB3BP20337 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB3BP20337 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB3BP20337 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB3BP20337 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB3BP20337 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
RAB3BP20337 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB3BP20337 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RAB3BP20337 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB3BP20337 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
RAB3BP20337 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.06
RAB3BP20337 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.71□□□□□ -0.06
RAB3BP20337 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.71□□□□□ -0.06
RAB3BP20337 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.71□□□□□ -0.06
RAB3BP20337 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.71□□□□□ -0.06
RAB3BP20337 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.71□□□□□ -0.06
RAB3BP20337 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB3BP20337 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RAB3BP20337 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB3BP20337 AC132938.5-201ENST00000624980 1813 ntBASIC14.71□□□□□ -0.06
RAB3BP20337 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB3BP20337 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.71□□□□□ -0.06
RAB3BP20337 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB3BP20337 AC006449.6-201ENST00000612330 2296 ntBASIC14.71□□□□□ -0.06
RAB3BP20337 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.71□□□□□ -0.06
RAB3BP20337 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RAB3BP20337 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB3BP20337 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
RAB3BP20337 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB3BP20337 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB3BP20337 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 GGT4P-201ENST00000623672 1708 ntBASIC14.7□□□□□ -0.06
RAB3BP20337 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.7□□□□□ -0.06
RAB3BP20337 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.7□□□□□ -0.06
RAB3BP20337 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB3BP20337 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAB3BP20337 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB3BP20337 GGT3P-204ENST00000453783 1664 ntBASIC14.7□□□□□ -0.06
RAB3BP20337 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAB3BP20337 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 LINC02228-204ENST00000642115 2962 ntBASIC14.7□□□□□ -0.06
RAB3BP20337 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3BP20337 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.7□□□□□ -0.06
RAB3BP20337 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3BP20337 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3BP20337 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB3BP20337 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3BP20337 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3BP20337 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAB3BP20337 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3BP20337 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAB3BP20337 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms