Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A2P16615 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 KRT18P55-202ENST00000578578 1546 ntBASIC18.49■□□□□ 0.55
ATP2A2P16615 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 AC046185.3-201ENST00000623228 1824 ntBASIC18.49■□□□□ 0.55
ATP2A2P16615 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A2P16615 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 AC097493.3-201ENST00000509725 367 ntBASIC18.49■□□□□ 0.55
ATP2A2P16615 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.49■□□□□ 0.55
ATP2A2P16615 LINC01225-203ENST00000563550 1244 ntBASIC18.49■□□□□ 0.55
ATP2A2P16615 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 AL359881.2-201ENST00000602973 570 ntBASIC18.49■□□□□ 0.55
ATP2A2P16615 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.49■□□□□ 0.55
ATP2A2P16615 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A2P16615 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A2P16615 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A2P16615 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ATP2A2P16615 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A2P16615 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A2P16615 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP2A2P16615 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ATP2A2P16615 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A2P16615 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 MIR6080-201ENST00000617359 66 ntBASIC18.48■□□□□ 0.55
ATP2A2P16615 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A2P16615 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A2P16615 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A2P16615 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A2P16615 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A2P16615 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
ATP2A2P16615 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A2P16615 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A2P16615 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A2P16615 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A2P16615 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A2P16615 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A2P16615 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP2A2P16615 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A2P16615 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A2P16615 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A2P16615 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A2P16615 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A2P16615 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A2P16615 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A2P16615 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A2P16615 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
ATP2A2P16615 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A2P16615 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A2P16615 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A2P16615 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A2P16615 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.46■□□□□ 0.55
ATP2A2P16615 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms