Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT3P12035 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT3P12035 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.63■□□□□ 0.41
KRT3P12035 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT3P12035 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KRT3P12035 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT3P12035 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT3P12035 VN2R19P-201ENST00000442399 1052 ntBASIC17.62■□□□□ 0.41
KRT3P12035 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KRT3P12035 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT3P12035 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT3P12035 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT3P12035 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT3P12035 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.62■□□□□ 0.41
KRT3P12035 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT3P12035 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT3P12035 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT3P12035 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 AL512652.2-201ENST00000625156 1716 ntBASIC17.61■□□□□ 0.41
KRT3P12035 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 CRYGEP-201ENST00000412192 528 ntBASIC17.61■□□□□ 0.41
KRT3P12035 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 CXCL1P1-201ENST00000502804 216 ntBASIC17.61■□□□□ 0.41
KRT3P12035 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT3P12035 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT3P12035 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT3P12035 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT3P12035 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 ACTL9-202ENST00000612068 1252 ntBASIC17.61■□□□□ 0.41
KRT3P12035 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.61■□□□□ 0.41
KRT3P12035 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
KRT3P12035 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KRT3P12035 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
KRT3P12035 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
KRT3P12035 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KRT3P12035 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT3P12035 ALOX12P2-203ENST00000570921 1945 ntBASIC17.6■□□□□ 0.41
KRT3P12035 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT3P12035 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT3P12035 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT3P12035 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KRT3P12035 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KRT3P12035 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT3P12035 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms